PredMHC is a machine learning-based prediction model which can effectively divide the input sequence into MHC (major histocompatibility complex) and non-MHC. The model framework is shown below.
Welcom to PredMHC server: a bioinformatics webserver for the prediction of MHC proteins.
Example fasta Sequences:
>D0FB79
DMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLIKERIAQDDCEKGFLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIVERMAGRRAHLPSGRTYHTVYNPPKEEGKDDVTGEDLVVRDDDKEETVRAR
>P28078
MEHEQKSGAVLLRLLRLLWLLPHSWAVLEASTPVLWDDPQNHTFRHTLFCQDGIPNIGLSETYDEDELFSFDFSQNTRVPRLPDFAEWAQGQGDASAIAFGKSFCEMLMREVSPKLEGQIPVSRGLSVAEVFTLKPLEFGKPNTLVCFISNLFPPTLTVNWQLHSAPVEGASPTSISAVDGLTFQAFSYLNFTPEPFDLYSCTVTHEIDRYTAIAYWVPQNALPSDLLENALCGVAFALGVLGTIIGIVFFLCSQRPCSGD
Enter the protein sequences in FASTA format (click here for example).
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Results
| No. | Title | Prediction result | probability |
|---|
The data set used in our research includes 6712 positive samples and 6776 negative samples.
Please click below to download.
Dr. Dong Chen
Email: peakgrin@qzc.edu.cn
Dr. YanJuan Li
Email: liyanjuan@qzc.edu.cn